Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 TARDBPP1-201ENST00000442013 1203 ntBASIC12.89□□□□□ -0.35
CD40LGP29965 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40LGP29965 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40LGP29965 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.89□□□□□ -0.35
CD40LGP29965 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.89□□□□□ -0.35
CD40LGP29965 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.89□□□□□ -0.35
CD40LGP29965 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 AC004835.2-201ENST00000603762 682 ntBASIC12.89□□□□□ -0.35
CD40LGP29965 AC092902.6-201ENST00000641783 218 ntBASIC12.89□□□□□ -0.35
CD40LGP29965 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40LGP29965 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.89□□□□□ -0.35
CD40LGP29965 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CD40LGP29965 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CD40LGP29965 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40LGP29965 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.88□□□□□ -0.35
CD40LGP29965 LINC01165-201ENST00000445190 1623 ntBASIC12.88□□□□□ -0.35
CD40LGP29965 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CD40LGP29965 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 AC004623.1-201ENST00000624592 2127 ntBASIC12.88□□□□□ -0.35
CD40LGP29965 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.88□□□□□ -0.35
CD40LGP29965 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CD40LGP29965 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CD40LGP29965 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40LGP29965 RPSAP43-201ENST00000402237 625 ntBASIC12.88□□□□□ -0.35
CD40LGP29965 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
CD40LGP29965 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.88□□□□□ -0.35
CD40LGP29965 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.88□□□□□ -0.35
CD40LGP29965 AC005237.2-201ENST00000434368 219 ntBASIC12.88□□□□□ -0.35
CD40LGP29965 AL592309.1-201ENST00000443127 649 ntBASIC12.88□□□□□ -0.35
CD40LGP29965 AC112482.1-201ENST00000492080 688 ntBASIC12.88□□□□□ -0.35
CD40LGP29965 AP000344.2-201ENST00000512987 629 ntBASIC12.88□□□□□ -0.35
CD40LGP29965 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.88□□□□□ -0.35
CD40LGP29965 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.88□□□□□ -0.35
CD40LGP29965 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.88□□□□□ -0.35
CD40LGP29965 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.88□□□□□ -0.35
CD40LGP29965 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40LGP29965 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.88□□□□□ -0.35
CD40LGP29965 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.88□□□□□ -0.35
CD40LGP29965 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CD40LGP29965 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CD40LGP29965 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CD40LGP29965 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CD40LGP29965 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CD40LGP29965 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 AC026992.2-203ENST00000563004 2419 ntBASIC12.88□□□□□ -0.35
CD40LGP29965 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CD40LGP29965 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40LGP29965 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 UXT-AS1-201ENST00000590504 1525 ntBASIC12.88□□□□□ -0.35
CD40LGP29965 KRT8P14-201ENST00000414254 1442 ntBASIC12.88□□□□□ -0.35
CD40LGP29965 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40LGP29965 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40LGP29965 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CD40LGP29965 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 AL137783.1-201ENST00000623494 1896 ntBASIC12.87□□□□□ -0.35
CD40LGP29965 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.87□□□□□ -0.35
CD40LGP29965 STRCP1-201ENST00000509801 5328 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms