Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CTGFP29279 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.86■□□□□ 0.13
CTGFP29279 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.86■□□□□ 0.13
CTGFP29279 Z98885.3-201ENST00000624882 1757 ntBASIC15.86■□□□□ 0.13
CTGFP29279 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC15.86■□□□□ 0.13
CTGFP29279 U3.5-201ENST00000363448 216 ntBASIC15.86■□□□□ 0.13
CTGFP29279 HDGF-202ENST00000368206 960 ntTSL 5 BASIC15.86■□□□□ 0.13
CTGFP29279 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC15.86■□□□□ 0.13
CTGFP29279 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.86■□□□□ 0.13
CTGFP29279 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC15.86■□□□□ 0.13
CTGFP29279 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.86■□□□□ 0.13
CTGFP29279 FAM197Y6-201ENST00000420524 766 ntBASIC15.86■□□□□ 0.13
CTGFP29279 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC15.86■□□□□ 0.13
CTGFP29279 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 IGKV1OR-2-201ENST00000457995 350 ntBASIC15.86■□□□□ 0.13
CTGFP29279 TPT1P6-201ENST00000458298 514 ntBASIC15.86■□□□□ 0.13
CTGFP29279 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.86■□□□□ 0.13
CTGFP29279 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC15.86■□□□□ 0.13
CTGFP29279 AC004923.3-201ENST00000527532 355 ntBASIC15.86■□□□□ 0.13
CTGFP29279 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.86■□□□□ 0.13
CTGFP29279 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC15.86■□□□□ 0.13
CTGFP29279 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC15.86■□□□□ 0.13
CTGFP29279 RN7SL524P-201ENST00000581152 300 ntBASIC15.86■□□□□ 0.13
CTGFP29279 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 MIR8071-1-201ENST00000616769 65 ntBASIC15.86■□□□□ 0.13
CTGFP29279 MIR8071-2-201ENST00000616772 65 ntBASIC15.86■□□□□ 0.13
CTGFP29279 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 AC007950.2-201ENST00000615045 2347 ntBASIC15.86■□□□□ 0.13
CTGFP29279 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.86■□□□□ 0.13
CTGFP29279 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.86■□□□□ 0.13
CTGFP29279 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CTGFP29279 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
CTGFP29279 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.86■□□□□ 0.13
CTGFP29279 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.86■□□□□ 0.13
CTGFP29279 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CTGFP29279 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTGFP29279 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.86■□□□□ 0.13
CTGFP29279 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.85■□□□□ 0.13
CTGFP29279 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CTGFP29279 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CTGFP29279 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CTGFP29279 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CTGFP29279 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CTGFP29279 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CTGFP29279 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.85■□□□□ 0.13
CTGFP29279 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.85■□□□□ 0.13
CTGFP29279 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.85■□□□□ 0.13
CTGFP29279 AC092910.2-201ENST00000491262 348 ntBASIC15.85■□□□□ 0.13
CTGFP29279 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CTGFP29279 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC15.85■□□□□ 0.13
CTGFP29279 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC15.85■□□□□ 0.13
CTGFP29279 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 AP001462.1-201ENST00000594089 452 ntBASIC15.85■□□□□ 0.13
CTGFP29279 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.85■□□□□ 0.13
CTGFP29279 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CTGFP29279 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CTGFP29279 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CTGFP29279 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CTGFP29279 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CTGFP29279 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTGFP29279 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms