Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.33□□□□□ -0.44
VAMP1P23763 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
VAMP1P23763 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VAMP1P23763 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 AL691447.1-201ENST00000419456 387 ntBASIC12.33□□□□□ -0.44
VAMP1P23763 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.33□□□□□ -0.44
VAMP1P23763 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.33□□□□□ -0.44
VAMP1P23763 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VAMP1P23763 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.33□□□□□ -0.44
VAMP1P23763 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.33□□□□□ -0.44
VAMP1P23763 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VAMP1P23763 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.33□□□□□ -0.44
VAMP1P23763 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VAMP1P23763 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.33□□□□□ -0.44
VAMP1P23763 AC092364.2-202ENST00000597012 1073 ntBASIC12.33□□□□□ -0.44
VAMP1P23763 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.33□□□□□ -0.44
VAMP1P23763 AC104692.2-201ENST00000603054 253 ntBASIC12.33□□□□□ -0.44
VAMP1P23763 AC000095.1-201ENST00000603208 874 ntBASIC12.33□□□□□ -0.44
VAMP1P23763 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
VAMP1P23763 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VAMP1P23763 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.33□□□□□ -0.44
VAMP1P23763 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.33□□□□□ -0.44
VAMP1P23763 LINC00567-201ENST00000569854 3409 ntBASIC12.33□□□□□ -0.44
VAMP1P23763 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VAMP1P23763 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VAMP1P23763 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.33□□□□□ -0.44
VAMP1P23763 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.33□□□□□ -0.44
VAMP1P23763 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VAMP1P23763 AC015688.4-201ENST00000580780 1647 ntBASIC12.33□□□□□ -0.44
VAMP1P23763 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VAMP1P23763 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.33□□□□□ -0.44
VAMP1P23763 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
VAMP1P23763 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
VAMP1P23763 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAMP1P23763 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
VAMP1P23763 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
VAMP1P23763 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.32□□□□□ -0.44
VAMP1P23763 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.32□□□□□ -0.44
VAMP1P23763 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC12.32□□□□□ -0.44
VAMP1P23763 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
VAMP1P23763 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 YBX2P1-201ENST00000394192 760 ntBASIC12.32□□□□□ -0.44
VAMP1P23763 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.32□□□□□ -0.44
VAMP1P23763 MED15P5-201ENST00000423150 992 ntBASIC12.32□□□□□ -0.44
VAMP1P23763 ACTG1P14-201ENST00000446382 1122 ntBASIC12.32□□□□□ -0.44
VAMP1P23763 KRT18P3-201ENST00000451602 1288 ntBASIC12.32□□□□□ -0.44
VAMP1P23763 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.32□□□□□ -0.44
VAMP1P23763 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.32□□□□□ -0.44
VAMP1P23763 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.32□□□□□ -0.44
VAMP1P23763 AC108673.2-201ENST00000608909 565 ntBASIC12.32□□□□□ -0.44
VAMP1P23763 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms