Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC009474.1-201ENST00000455096 1565 ntBASIC12.43□□□□□ -0.42
CCL1P22362 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 SHMT1P1-201ENST00000419974 1312 ntBASIC12.43□□□□□ -0.42
CCL1P22362 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.43□□□□□ -0.42
CCL1P22362 AC100850.1-201ENST00000506768 649 ntBASIC12.43□□□□□ -0.42
CCL1P22362 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.43□□□□□ -0.42
CCL1P22362 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.43□□□□□ -0.42
CCL1P22362 AC003686.1-201ENST00000550956 1034 ntBASIC12.43□□□□□ -0.42
CCL1P22362 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.43□□□□□ -0.42
CCL1P22362 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.43□□□□□ -0.42
CCL1P22362 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCL1P22362 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL1P22362 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 AC068760.1-201ENST00000493579 1953 ntBASIC12.42□□□□□ -0.42
CCL1P22362 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 AC103592.1-201ENST00000394513 664 ntBASIC12.42□□□□□ -0.42
CCL1P22362 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.42□□□□□ -0.42
CCL1P22362 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL1P22362 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 AC079316.1-201ENST00000548397 411 ntBASIC12.42□□□□□ -0.42
CCL1P22362 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL1P22362 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 AC009884.2-201ENST00000603110 324 ntBASIC12.42□□□□□ -0.42
CCL1P22362 CR392039.2-201ENST00000623182 509 ntBASIC12.42□□□□□ -0.42
CCL1P22362 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms