Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF3P18847 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.45■□□□□ 0.7
ATF3P18847 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATF3P18847 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF3P18847 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATF3P18847 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATF3P18847 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF3P18847 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATF3P18847 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATF3P18847 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.44■□□□□ 0.7
ATF3P18847 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 HLA-DMA-202ENST00000395303 1007 ntBASIC19.44■□□□□ 0.7
ATF3P18847 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC19.44■□□□□ 0.7
ATF3P18847 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 ZNF877P-201ENST00000437614 612 ntBASIC19.44■□□□□ 0.7
ATF3P18847 AP000533.1-201ENST00000456143 1177 ntBASIC19.44■□□□□ 0.7
ATF3P18847 AC011431.1-201ENST00000512971 230 ntBASIC19.44■□□□□ 0.7
ATF3P18847 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATF3P18847 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC19.44■□□□□ 0.7
ATF3P18847 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC19.44■□□□□ 0.7
ATF3P18847 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC19.44■□□□□ 0.7
ATF3P18847 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.44■□□□□ 0.7
ATF3P18847 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 AC064801.2-201ENST00000625052 1303 ntBASIC19.44■□□□□ 0.7
ATF3P18847 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF3P18847 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATF3P18847 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.43■□□□□ 0.7
ATF3P18847 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATF3P18847 RPL10-203ENST00000406022 748 ntTSL 3 BASIC19.43■□□□□ 0.7
ATF3P18847 AC103563.1-201ENST00000429316 123 ntBASIC19.43■□□□□ 0.7
ATF3P18847 AL136084.1-201ENST00000449172 318 ntBASIC19.43■□□□□ 0.7
ATF3P18847 TPT1P6-201ENST00000458298 514 ntBASIC19.43■□□□□ 0.7
ATF3P18847 DPY19L2P4-201ENST00000479881 442 ntBASIC19.43■□□□□ 0.7
ATF3P18847 ISL1-203ENST00000511384 981 ntTSL 5 BASIC19.43■□□□□ 0.7
ATF3P18847 AL512310.5-201ENST00000551999 515 ntBASIC19.43■□□□□ 0.7
ATF3P18847 AL049840.2-201ENST00000602722 535 ntBASIC19.43■□□□□ 0.7
ATF3P18847 AC005746.3-201ENST00000614751 393 ntBASIC19.43■□□□□ 0.7
ATF3P18847 AC020922.4-201ENST00000621389 339 ntBASIC19.43■□□□□ 0.7
ATF3P18847 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATF3P18847 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.43■□□□□ 0.7
ATF3P18847 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC19.43■□□□□ 0.7
ATF3P18847 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC19.43■□□□□ 0.7
ATF3P18847 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATF3P18847 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC19.43■□□□□ 0.7
ATF3P18847 AC092115.1-201ENST00000566277 1402 ntBASIC19.42■□□□□ 0.7
ATF3P18847 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATF3P18847 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.42■□□□□ 0.7
ATF3P18847 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC19.42■□□□□ 0.7
ATF3P18847 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.42■□□□□ 0.7
ATF3P18847 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC19.42■□□□□ 0.7
ATF3P18847 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC19.42■□□□□ 0.7
ATF3P18847 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC19.42■□□□□ 0.7
ATF3P18847 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC19.42■□□□□ 0.7
ATF3P18847 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC19.42■□□□□ 0.7
ATF3P18847 AC092910.2-201ENST00000491262 348 ntBASIC19.42■□□□□ 0.7
ATF3P18847 LY6E-215ENST00000523847 427 ntTSL 3 BASIC19.42■□□□□ 0.7
ATF3P18847 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC19.42■□□□□ 0.7
ATF3P18847 RN7SL480P-201ENST00000581481 294 ntBASIC19.42■□□□□ 0.7
ATF3P18847 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC19.42■□□□□ 0.7
ATF3P18847 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.42■□□□□ 0.7
ATF3P18847 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19.42■□□□□ 0.7
ATF3P18847 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.42■□□□□ 0.7
ATF3P18847 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
ATF3P18847 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF3P18847 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms