Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPBP07988 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPBP07988 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPBP07988 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPBP07988 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPBP07988 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.71□□□□□ -0.38
SFTPBP07988 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPBP07988 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPBP07988 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.7□□□□□ -0.38
SFTPBP07988 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
SFTPBP07988 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SFTPBP07988 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.7□□□□□ -0.38
SFTPBP07988 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.7□□□□□ -0.38
SFTPBP07988 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.7□□□□□ -0.38
SFTPBP07988 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.7□□□□□ -0.38
SFTPBP07988 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 SLC25A47P1-201ENST00000531577 414 ntBASIC12.7□□□□□ -0.38
SFTPBP07988 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.7□□□□□ -0.38
SFTPBP07988 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 BTNL10-201ENST00000595971 695 ntBASIC12.7□□□□□ -0.38
SFTPBP07988 AL512343.1-201ENST00000605837 169 ntBASIC12.7□□□□□ -0.38
SFTPBP07988 AC017083.2-201ENST00000608069 979 ntBASIC12.7□□□□□ -0.38
SFTPBP07988 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.7□□□□□ -0.38
SFTPBP07988 AL603764.1-201ENST00000636452 321 ntBASIC12.7□□□□□ -0.38
SFTPBP07988 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 SALL4P5-201ENST00000419001 1760 ntBASIC12.7□□□□□ -0.38
SFTPBP07988 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 MSTO2P-201ENST00000314835 1709 ntBASIC12.7□□□□□ -0.38
SFTPBP07988 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SFTPBP07988 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPBP07988 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPBP07988 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms