Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.19□□□□□ -0.3
HMGN1P05114 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
HMGN1P05114 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HMGN1P05114 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
HMGN1P05114 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 AC020910.5-201ENST00000623668 1865 ntBASIC13.19□□□□□ -0.3
HMGN1P05114 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGN1P05114 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HMGN1P05114 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 POM121L8P-201ENST00000417732 1281 ntBASIC13.18□□□□□ -0.3
HMGN1P05114 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 METTL21AP1-201ENST00000438852 635 ntBASIC13.18□□□□□ -0.3
HMGN1P05114 POM121L9P-203ENST00000441984 1285 ntBASIC13.18□□□□□ -0.3
HMGN1P05114 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 CLUHP6-201ENST00000580789 941 ntBASIC13.18□□□□□ -0.3
HMGN1P05114 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.18□□□□□ -0.3
HMGN1P05114 ENPP7P14-201ENST00000621765 1040 ntBASIC13.18□□□□□ -0.3
HMGN1P05114 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HMGN1P05114 AC009093.10-201ENST00000641956 1442 ntBASIC13.18□□□□□ -0.3
HMGN1P05114 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.18□□□□□ -0.3
HMGN1P05114 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HMGN1P05114 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
HMGN1P05114 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HMGN1P05114 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HMGN1P05114 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGN1P05114 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGN1P05114 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGN1P05114 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HMGN1P05114 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGN1P05114 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HMGN1P05114 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGN1P05114 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms