Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRIM3O75382 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 HSPB1P2-201ENST00000448722 546 ntBASIC13.6□□□□□ -0.23
TRIM3O75382 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.6□□□□□ -0.23
TRIM3O75382 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM3O75382 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM3O75382 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.6□□□□□ -0.23
TRIM3O75382 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM3O75382 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM3O75382 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 AL358472.3-201ENST00000608147 415 ntBASIC13.6□□□□□ -0.23
TRIM3O75382 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM3O75382 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 AP001002.3-201ENST00000623482 206 ntBASIC13.6□□□□□ -0.23
TRIM3O75382 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM3O75382 AC002472.3-201ENST00000640124 621 ntBASIC13.6□□□□□ -0.23
TRIM3O75382 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRIM3O75382 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM3O75382 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRIM3O75382 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM3O75382 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM3O75382 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 AC152010.1-201ENST00000415779 2006 ntBASIC13.59□□□□□ -0.23
TRIM3O75382 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRIM3O75382 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM3O75382 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM3O75382 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM3O75382 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRIM3O75382 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM3O75382 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRIM3O75382 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.59□□□□□ -0.23
TRIM3O75382 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRIM3O75382 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM3O75382 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM3O75382 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRIM3O75382 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.59□□□□□ -0.23
TRIM3O75382 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 AC100850.1-201ENST00000506768 649 ntBASIC13.59□□□□□ -0.23
TRIM3O75382 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM3O75382 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM3O75382 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM3O75382 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.59□□□□□ -0.23
TRIM3O75382 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM3O75382 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.59□□□□□ -0.23
TRIM3O75382 AL096828.3-201ENST00000615354 462 ntBASIC13.59□□□□□ -0.23
TRIM3O75382 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.59□□□□□ -0.23
TRIM3O75382 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM3O75382 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRIM3O75382 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM3O75382 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms