Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK1AO00322 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UPK1AO00322 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UPK1AO00322 AC008825.2-201ENST00000603374 718 ntBASIC13.74□□□□□ -0.21
UPK1AO00322 AL035252.4-201ENST00000624174 288 ntBASIC13.74□□□□□ -0.21
UPK1AO00322 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK1AO00322 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
UPK1AO00322 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.74□□□□□ -0.21
UPK1AO00322 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UPK1AO00322 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UPK1AO00322 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UPK1AO00322 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UPK1AO00322 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1AO00322 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1AO00322 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK1AO00322 AC063926.2-201ENST00000623766 1308 ntBASIC13.73□□□□□ -0.21
UPK1AO00322 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.73□□□□□ -0.21
UPK1AO00322 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
UPK1AO00322 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK1AO00322 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1AO00322 AL355994.2-201ENST00000447882 704 ntBASIC13.73□□□□□ -0.21
UPK1AO00322 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1AO00322 CICP12-201ENST00000455801 843 ntBASIC13.73□□□□□ -0.21
UPK1AO00322 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UPK1AO00322 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
UPK1AO00322 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.73□□□□□ -0.21
UPK1AO00322 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK1AO00322 AC079316.1-201ENST00000548397 411 ntBASIC13.73□□□□□ -0.21
UPK1AO00322 SORD2P-201ENST00000558556 1069 ntBASIC13.73□□□□□ -0.21
UPK1AO00322 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.73□□□□□ -0.21
UPK1AO00322 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.73□□□□□ -0.21
UPK1AO00322 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.73□□□□□ -0.21
UPK1AO00322 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1AO00322 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1AO00322 AC097376.2-205ENST00000610159 5334 ntBASIC13.73□□□□□ -0.21
UPK1AO00322 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
UPK1AO00322 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK1AO00322 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1AO00322 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK1AO00322 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UPK1AO00322 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1AO00322 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UPK1AO00322 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
UPK1AO00322 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 ANKRD19P-201ENST00000338192 862 ntBASIC13.72□□□□□ -0.21
UPK1AO00322 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 AC010141.1-201ENST00000411585 623 ntBASIC13.72□□□□□ -0.21
UPK1AO00322 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms