Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 TUBB8P4-201ENST00000511806 1324 ntBASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 MRPL37P1-201ENST00000592451 1337 ntBASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CCM2LQ9NUG4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 AP002761.4-201ENST00000565433 3361 ntBASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 AC098850.1-201ENST00000419919 790 ntBASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 TLE1P1-201ENST00000422965 589 ntBASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 MIR497HG-202ENST00000572453 3838 ntBASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 WFDC1-204ENST00000613603 549 ntBASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 AL033527.5-201ENST00000641382 801 ntBASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 AL138799.1-201ENST00000448213 1675 ntBASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.87□□□□□ -0.19
CCM2LQ9NUG4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 ANKRD19P-201ENST00000338192 862 ntBASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 AC092933.1-201ENST00000393644 945 ntBASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 KRT43P-201ENST00000434019 910 ntBASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 AL589987.1-201ENST00000453380 819 ntBASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms