Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AL139094.1-201ENST00000405549 1188 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 GPAA1P2-201ENST00000417923 928 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AC006033.1-201ENST00000440505 426 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 MIR4741-201ENST00000579822 90 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 ECM1P1-201ENST00000604092 1279 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AL118558.3-201ENST00000607414 1079 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 TCAM1P-207ENST00000485295 1537 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AC084364.1-201ENST00000551967 1556 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AC007787.1-201ENST00000588095 1583 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 INE2-201ENST00000630399 1874 ntBASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAF4Q9BUZ4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 BTBD6P1-201ENST00000412176 1267 ntBASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 BCYRN1-201ENST00000418539 200 ntBASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms