Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC104506.1-201ENST00000609247 429 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 AL390754.1-201ENST00000619088 582 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 AC005252.2-201ENST00000624630 1141 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 LINC00567-201ENST00000569854 3409 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
EBF4Q9BQW3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
EBF4Q9BQW3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 AC004967.1-201ENST00000453589 447 ntBASIC14.14□□□□□ -0.15
EBF4Q9BQW3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 DUX4L27-201ENST00000554796 1261 ntBASIC14.14□□□□□ -0.15
EBF4Q9BQW3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 RRP7BP-205ENST00000566851 833 ntBASIC14.14□□□□□ -0.15
EBF4Q9BQW3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.14□□□□□ -0.15
EBF4Q9BQW3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 USP17L6P-201ENST00000382470 1197 ntBASIC14.13□□□□□ -0.15
EBF4Q9BQW3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 AC136604.1-202ENST00000425471 771 ntBASIC14.13□□□□□ -0.15
EBF4Q9BQW3 AL442647.2-201ENST00000429864 857 ntBASIC14.13□□□□□ -0.15
EBF4Q9BQW3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 PUDPP3-201ENST00000445368 636 ntBASIC14.13□□□□□ -0.15
EBF4Q9BQW3 FAM86GP-201ENST00000448322 971 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms