Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 REXO1L6P-201ENST00000603433 1515 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 AL136309.1-201ENST00000403917 691 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 TLE1P1-201ENST00000422965 589 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 CNN2P10-201ENST00000443067 918 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 AL353718.1-201ENST00000451028 517 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 COX5BP1-201ENST00000507622 393 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 AC021269.1-201ENST00000526860 705 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 FAM8A2P-201ENST00000528813 1142 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 AC239868.3-201ENST00000577853 1234 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 AL357094.1-201ENST00000603845 844 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 ECM1P1-201ENST00000604092 1279 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 AC016252.1-201ENST00000609721 474 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 MIR6869-201ENST00000619434 62 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 AC138466.3-201ENST00000619983 221 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.2□□□□□ -0.3
USB1Q9BQ65 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 LINC01101-201ENST00000622953 1884 ntBASIC13.19□□□□□ -0.3
USB1Q9BQ65 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 MIR1908-201ENST00000410394 80 ntBASIC13.19□□□□□ -0.3
USB1Q9BQ65 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms