Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 BEND3P3-201ENST00000611030 2440 ntBASIC16.66■□□□□ 0.26
ARID3AQ99856 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ARID3AQ99856 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.66■□□□□ 0.26
ARID3AQ99856 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.66■□□□□ 0.26
ARID3AQ99856 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.66■□□□□ 0.26
ARID3AQ99856 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 RARRES2P5-201ENST00000564013 466 ntBASIC16.66■□□□□ 0.26
ARID3AQ99856 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.66■□□□□ 0.26
ARID3AQ99856 AC138761.1-201ENST00000584393 385 ntBASIC16.66■□□□□ 0.26
ARID3AQ99856 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.66■□□□□ 0.26
ARID3AQ99856 AL132655.2-201ENST00000596276 594 ntBASIC16.66■□□□□ 0.26
ARID3AQ99856 MIR8072-201ENST00000614241 80 ntBASIC16.66■□□□□ 0.26
ARID3AQ99856 FP325330.2-201ENST00000624219 5630 ntBASIC16.66■□□□□ 0.26
ARID3AQ99856 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.66■□□□□ 0.26
ARID3AQ99856 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ARID3AQ99856 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.66■□□□□ 0.26
ARID3AQ99856 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC16.66■□□□□ 0.26
ARID3AQ99856 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARID3AQ99856 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ARID3AQ99856 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ARID3AQ99856 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.66■□□□□ 0.26
ARID3AQ99856 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC16.65■□□□□ 0.26
ARID3AQ99856 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ARID3AQ99856 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.65■□□□□ 0.26
ARID3AQ99856 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.65■□□□□ 0.26
ARID3AQ99856 FAM207CP-201ENST00000443486 507 ntBASIC16.65■□□□□ 0.26
ARID3AQ99856 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.65■□□□□ 0.26
ARID3AQ99856 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
ARID3AQ99856 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ARID3AQ99856 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC16.65■□□□□ 0.26
ARID3AQ99856 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ARID3AQ99856 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ARID3AQ99856 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms