Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 BEND3P3-201ENST00000611030 2440 ntBASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHAMP1Q96JM3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 AC064801.2-201ENST00000625052 1303 ntBASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 AL031719.1-201ENST00000623365 2587 ntBASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 AL161932.2-201ENST00000435436 679 ntBASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 PUDPP3-201ENST00000445368 636 ntBASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 ECM1P1-201ENST00000604092 1279 ntBASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 ENPP7P14-201ENST00000621765 1040 ntBASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHAMP1Q96JM3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 KRT18P25-201ENST00000508931 1278 ntBASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms