Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AC103592.1-201ENST00000394513 664 ntBASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 XBP1P1-201ENST00000436573 652 ntBASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AK2P2-201ENST00000439142 405 ntBASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 KRT223P-202ENST00000449164 1292 ntBASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 HILS1-202ENST00000545329 423 ntBASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AC010328.2-201ENST00000597698 1111 ntBASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AC111170.3-201ENST00000624282 2464 ntBASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 CICP17-201ENST00000418553 2377 ntBASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 AC089987.1-201ENST00000551654 2209 ntBASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 VDAC1P1-201ENST00000439229 848 ntBASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 Z93015.1-201ENST00000451718 390 ntBASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 HLA-J-204ENST00000495278 958 ntBASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 MIR4259-201ENST00000584466 101 ntBASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 AC017083.2-201ENST00000608069 979 ntBASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 MIR6805-201ENST00000615055 62 ntBASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDLIM5Q96HC4 FAM90A7P-201ENST00000382628 1395 ntBASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 FAM90A23P-201ENST00000400136 1395 ntBASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms