Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 AC136604.1-202ENST00000425471 771 ntBASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 SORD2P-201ENST00000558556 1069 ntBASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 SRP14-208ENST00000560773 468 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 AC120498.7-201ENST00000562876 330 ntBASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 ANKRD26P1-203ENST00000569528 966 ntBASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 RN7SL602P-201ENST00000578326 324 ntBASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 RN7SL718P-201ENST00000581254 303 ntBASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 KRT8P43-201ENST00000406052 1458 ntBASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 FLJ16779-201ENST00000612722 7638 ntBASIC15.44■□□□□ 0.06
TRIM43Q96BQ3 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 AC026691.1-201ENST00000602502 2017 ntBASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 SNORA57-201ENST00000383870 149 ntBASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 AC026336.4-201ENST00000624565 1050 ntBASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM43Q96BQ3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms