Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 AC087203.1-201ENST00000532111 1181 ntBASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 AC005777.1-201ENST00000588332 187 ntBASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 NAV1-210ENST00000593583 726 ntBASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 FKBP4P8-201ENST00000610931 1369 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 GEMIN8P4-201ENST00000380526 729 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 AL357373.1-201ENST00000394974 322 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 AF274858.1-201ENST00000406288 372 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 AP000244.1-201ENST00000424582 201 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 RN7SL288P-201ENST00000490496 291 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 AC023968.2-201ENST00000560593 1049 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 MIR5001-201ENST00000580185 100 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 AC073869.4-201ENST00000620841 800 ntBASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KLHDC9Q8NEP7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 AL080243.1-201ENST00000423293 1060 ntBASIC15.65■□□□□ 0.1
KLHDC9Q8NEP7 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms