Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS8Q8N3P4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
VPS8Q8N3P4 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS8Q8N3P4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC22.19■■□□□ 1.14
VPS8Q8N3P4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC22.19■■□□□ 1.14
VPS8Q8N3P4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS8Q8N3P4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS8Q8N3P4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC22.19■■□□□ 1.14
VPS8Q8N3P4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 AC004554.1-201ENST00000422830 1468 ntBASIC22.18■■□□□ 1.14
VPS8Q8N3P4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC22.18■■□□□ 1.14
VPS8Q8N3P4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 AP002803.1-201ENST00000528836 498 ntBASIC22.18■■□□□ 1.14
VPS8Q8N3P4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 KRT8P2-201ENST00000556193 944 ntBASIC22.18■■□□□ 1.14
VPS8Q8N3P4 AC087045.2-201ENST00000606279 1003 ntBASIC22.18■■□□□ 1.14
VPS8Q8N3P4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 TBC1D27-202ENST00000424239 1573 ntBASIC22.18■■□□□ 1.14
VPS8Q8N3P4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 ODCP-201ENST00000459650 1639 ntBASIC22.18■■□□□ 1.14
VPS8Q8N3P4 GOLGA8IP-202ENST00000611635 2100 ntBASIC22.18■■□□□ 1.14
VPS8Q8N3P4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS8Q8N3P4 GOLGA8UP-201ENST00000527159 1755 ntBASIC22.17■■□□□ 1.14
VPS8Q8N3P4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 AC092573.1-201ENST00000433054 884 ntBASIC22.17■■□□□ 1.14
VPS8Q8N3P4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 IGHV1-12-201ENST00000518307 205 ntBASIC22.17■■□□□ 1.14
VPS8Q8N3P4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 AC011474.4-201ENST00000623523 2076 ntBASIC22.17■■□□□ 1.14
VPS8Q8N3P4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS8Q8N3P4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 RNVU1-8-201ENST00000364272 125 ntBASIC22.16■■□□□ 1.14
VPS8Q8N3P4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 OR5BD1P-201ENST00000532527 817 ntBASIC22.16■■□□□ 1.14
VPS8Q8N3P4 AP000911.2-201ENST00000534330 502 ntBASIC22.16■■□□□ 1.14
VPS8Q8N3P4 MIR4265-201ENST00000582152 99 ntBASIC22.16■■□□□ 1.14
VPS8Q8N3P4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 COX6A1P2-201ENST00000620597 330 ntBASIC22.16■■□□□ 1.14
VPS8Q8N3P4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 PDXDC2P-206ENST00000534700 1315 ntBASIC22.16■■□□□ 1.14
VPS8Q8N3P4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms