Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 NRADDP-202ENST00000641269 1585 ntBASIC19.74■□□□□ 0.75
UBR1Q8IWV7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 AL121753.2-201ENST00000624581 1461 ntBASIC19.74■□□□□ 0.75
UBR1Q8IWV7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBR1Q8IWV7 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 RN7SL672P-201ENST00000474091 317 ntBASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AC023051.2-201ENST00000541141 460 ntBASIC19.73■□□□□ 0.75
UBR1Q8IWV7 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AC008622.3-201ENST00000621170 600 ntBASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 POP5-201ENST00000341039 913 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 CDKN2A-AS1-201ENST00000441769 823 ntBASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AL450487.2-201ENST00000615934 407 ntBASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AL590556.2-202ENST00000636906 844 ntBASIC19.73■□□□□ 0.75
UBR1Q8IWV7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBR1Q8IWV7 MTHFR-210ENST00000641407 2387 ntBASIC19.72■□□□□ 0.75
UBR1Q8IWV7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 AL954722.1-201ENST00000431238 259 ntBASIC19.72■□□□□ 0.75
UBR1Q8IWV7 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 AC022532.1-201ENST00000624563 1728 ntBASIC19.72■□□□□ 0.75
UBR1Q8IWV7 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
UBR1Q8IWV7 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 TUBB2BP1-201ENST00000404155 871 ntBASIC19.71■□□□□ 0.75
UBR1Q8IWV7 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms