Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 CU639417.3-201ENST00000624240 1404 ntBASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 MBLAC2-202ENST00000514906 1936 ntBASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 ARSEP1-201ENST00000420443 635 ntBASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 CICP12-201ENST00000455801 843 ntBASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 AC027237.1-201ENST00000560942 655 ntBASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 AL358472.3-201ENST00000608147 415 ntBASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 AL358472.5-202ENST00000641448 1267 ntBASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 AL157996.1-201ENST00000624684 2299 ntBASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00346Q8IVM7 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 AC130686.1-201ENST00000622936 2466 ntBASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 AC111170.3-201ENST00000624282 2464 ntBASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 COX5BP8-201ENST00000416911 349 ntBASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 CNN2P8-201ENST00000421872 913 ntBASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms