Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 AL645937.2-201ENST00000396808 931 ntBASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 AC098850.1-201ENST00000419919 790 ntBASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 ELK1P1-201ENST00000485699 580 ntBASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 ENPP7P5-201ENST00000541031 1031 ntBASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 SPDYE22P-201ENST00000582158 798 ntBASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 BX539320.1-201ENST00000623759 877 ntBASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 AL031719.1-201ENST00000623365 2587 ntBASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 AC022497.1-201ENST00000624916 3691 ntBASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 KRT8P22-201ENST00000562317 1415 ntBASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 AC104457.1-201ENST00000401024 814 ntBASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 AP006294.1-201ENST00000415407 339 ntBASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 AP001582.1-201ENST00000525856 295 ntBASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 AL359711.2-201ENST00000563105 872 ntBASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 AL358472.5-202ENST00000641448 1267 ntBASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 AP002761.4-201ENST00000565433 3361 ntBASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM53Q6P2H8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 PCDHA5-203ENST00000614258 4248 ntBASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC012531.1-201ENST00000562848 2680 ntBASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 MIR193BHG-211ENST00000641433 5365 ntBASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms