Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 IL9RP2-201ENST00000423948 1312 ntBASIC13.68□□□□□ -0.22
LPCAT4Q643R3 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 MED15P5-201ENST00000423150 992 ntBASIC13.68□□□□□ -0.22
LPCAT4Q643R3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LPCAT4Q643R3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 AC103988.2-201ENST00000561804 725 ntBASIC13.67□□□□□ -0.22
LPCAT4Q643R3 DUX4L47-201ENST00000566374 394 ntBASIC13.67□□□□□ -0.22
LPCAT4Q643R3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 ABCD1P2-201ENST00000429313 1601 ntBASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms