Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AC105206.1-202ENST00000314927 2368 ntBASIC14.01□□□□□ -0.17
HMGCS1Q01581 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 CNN2P8-201ENST00000421872 913 ntBASIC14.01□□□□□ -0.17
HMGCS1Q01581 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AC005586.2-201ENST00000563946 837 ntBASIC14.01□□□□□ -0.17
HMGCS1Q01581 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.01□□□□□ -0.17
HMGCS1Q01581 AC027601.3-201ENST00000622907 509 ntBASIC14.01□□□□□ -0.17
HMGCS1Q01581 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGCS1Q01581 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGCS1Q01581 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14□□□□□ -0.17
HMGCS1Q01581 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HMGCS1Q01581 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14□□□□□ -0.17
HMGCS1Q01581 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14□□□□□ -0.17
HMGCS1Q01581 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14□□□□□ -0.17
HMGCS1Q01581 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14□□□□□ -0.17
HMGCS1Q01581 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HMGCS1Q01581 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HMGCS1Q01581 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14□□□□□ -0.17
HMGCS1Q01581 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14□□□□□ -0.17
HMGCS1Q01581 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14□□□□□ -0.17
HMGCS1Q01581 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14□□□□□ -0.17
HMGCS1Q01581 MIR1202-201ENST00000408529 83 ntBASIC14□□□□□ -0.17
HMGCS1Q01581 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14□□□□□ -0.17
HMGCS1Q01581 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14□□□□□ -0.17
HMGCS1Q01581 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14□□□□□ -0.17
HMGCS1Q01581 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14□□□□□ -0.17
HMGCS1Q01581 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14□□□□□ -0.17
HMGCS1Q01581 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14□□□□□ -0.17
HMGCS1Q01581 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14□□□□□ -0.17
HMGCS1Q01581 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14□□□□□ -0.17
HMGCS1Q01581 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14□□□□□ -0.17
HMGCS1Q01581 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HMGCS1Q01581 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms