Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.33■□□□□ 0.2
TPM4P67936 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.33■□□□□ 0.2
TPM4P67936 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.33■□□□□ 0.2
TPM4P67936 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
TPM4P67936 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TPM4P67936 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.33■□□□□ 0.2
TPM4P67936 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TPM4P67936 AC134684.3-201ENST00000641758 218 ntBASIC16.33■□□□□ 0.2
TPM4P67936 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TPM4P67936 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TPM4P67936 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TPM4P67936 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.33■□□□□ 0.2
TPM4P67936 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPM4P67936 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TPM4P67936 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TPM4P67936 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TPM4P67936 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 MIR943-201ENST00000401286 94 ntBASIC16.32■□□□□ 0.2
TPM4P67936 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 SOCS2P1-201ENST00000417727 557 ntBASIC16.32■□□□□ 0.2
TPM4P67936 TSSK5P-201ENST00000423978 907 ntBASIC16.32■□□□□ 0.2
TPM4P67936 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.32■□□□□ 0.2
TPM4P67936 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.32■□□□□ 0.2
TPM4P67936 AC004967.1-201ENST00000453589 447 ntBASIC16.32■□□□□ 0.2
TPM4P67936 FO681548.1-201ENST00000455617 1132 ntBASIC16.32■□□□□ 0.2
TPM4P67936 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.32■□□□□ 0.2
TPM4P67936 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.32■□□□□ 0.2
TPM4P67936 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TPM4P67936 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 AC020658.7-201ENST00000624274 2442 ntBASIC16.32■□□□□ 0.2
TPM4P67936 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM4P67936 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM4P67936 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.32■□□□□ 0.2
TPM4P67936 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 NUTM2HP-201ENST00000442076 2498 ntBASIC16.31■□□□□ 0.2
TPM4P67936 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM4P67936 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.31■□□□□ 0.2
TPM4P67936 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TPM4P67936 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM4P67936 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM4P67936 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TPM4P67936 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM4P67936 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM4P67936 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.31■□□□□ 0.2
TPM4P67936 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.31■□□□□ 0.2
TPM4P67936 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TPM4P67936 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM4P67936 AC104794.3-201ENST00000566840 1248 ntBASIC16.31■□□□□ 0.2
TPM4P67936 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.31■□□□□ 0.2
TPM4P67936 AP005019.2-201ENST00000615104 511 ntBASIC16.31■□□□□ 0.2
TPM4P67936 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.31■□□□□ 0.2
TPM4P67936 AC004840.1-201ENST00000636359 365 ntBASIC16.31■□□□□ 0.2
TPM4P67936 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TPM4P67936 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms