Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNRPFP62306 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SNRPFP62306 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.66■□□□□ 0.1
SNRPFP62306 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.66■□□□□ 0.1
SNRPFP62306 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNRPFP62306 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SNRPFP62306 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SNRPFP62306 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SNRPFP62306 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SNRPFP62306 KRT8P21-201ENST00000430398 1491 ntBASIC15.65■□□□□ 0.1
SNRPFP62306 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SNRPFP62306 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 KRT8P13-201ENST00000463294 1010 ntBASIC15.65■□□□□ 0.1
SNRPFP62306 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 AC093752.3-201ENST00000567343 901 ntBASIC15.65■□□□□ 0.1
SNRPFP62306 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 AL645939.5-201ENST00000606834 243 ntBASIC15.65■□□□□ 0.1
SNRPFP62306 AL451050.2-201ENST00000606967 682 ntBASIC15.65■□□□□ 0.1
SNRPFP62306 AC026740.1-201ENST00000607068 791 ntBASIC15.65■□□□□ 0.1
SNRPFP62306 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.65■□□□□ 0.1
SNRPFP62306 AL805961.1-203ENST00000641078 1258 ntBASIC15.65■□□□□ 0.1
SNRPFP62306 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SNRPFP62306 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SNRPFP62306 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.65■□□□□ 0.1
SNRPFP62306 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRPFP62306 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SNRPFP62306 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.65■□□□□ 0.1
SNRPFP62306 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRPFP62306 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SNRPFP62306 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.64■□□□□ 0.09
SNRPFP62306 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SNRPFP62306 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 AC016700.1-201ENST00000429424 312 ntBASIC15.64■□□□□ 0.09
SNRPFP62306 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SNRPFP62306 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.64■□□□□ 0.09
SNRPFP62306 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.64■□□□□ 0.09
SNRPFP62306 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.64■□□□□ 0.09
SNRPFP62306 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.64■□□□□ 0.09
SNRPFP62306 AC020914.3-201ENST00000594712 304 ntBASIC15.64■□□□□ 0.09
SNRPFP62306 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SNRPFP62306 AC244452.3-201ENST00000636814 210 ntBASIC15.64■□□□□ 0.09
SNRPFP62306 NAP1L6-202ENST00000641404 1222 ntBASIC15.64■□□□□ 0.09
SNRPFP62306 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SNRPFP62306 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.64■□□□□ 0.09
SNRPFP62306 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.64■□□□□ 0.09
SNRPFP62306 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SNRPFP62306 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRPFP62306 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SNRPFP62306 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms