Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.02□□□□□ -0.32
VBP1P61758 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VBP1P61758 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
VBP1P61758 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VBP1P61758 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VBP1P61758 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
VBP1P61758 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
VBP1P61758 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VBP1P61758 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VBP1P61758 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VBP1P61758 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VBP1P61758 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VBP1P61758 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
VBP1P61758 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VBP1P61758 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.02□□□□□ -0.33
VBP1P61758 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
VBP1P61758 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.02□□□□□ -0.33
VBP1P61758 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.02□□□□□ -0.33
VBP1P61758 ADH5P3-201ENST00000433842 1137 ntBASIC13.02□□□□□ -0.33
VBP1P61758 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.02□□□□□ -0.33
VBP1P61758 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.02□□□□□ -0.33
VBP1P61758 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.02□□□□□ -0.33
VBP1P61758 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.02□□□□□ -0.33
VBP1P61758 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
VBP1P61758 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.02□□□□□ -0.33
VBP1P61758 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.02□□□□□ -0.33
VBP1P61758 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.02□□□□□ -0.33
VBP1P61758 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.02□□□□□ -0.33
VBP1P61758 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 RN7SL828P-201ENST00000607615 303 ntBASIC13.02□□□□□ -0.33
VBP1P61758 BAP1-211ENST00000615113 489 ntBASIC13.02□□□□□ -0.33
VBP1P61758 AC091812.2-201ENST00000619081 385 ntBASIC13.02□□□□□ -0.33
VBP1P61758 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.02□□□□□ -0.33
VBP1P61758 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
VBP1P61758 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.02□□□□□ -0.33
VBP1P61758 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
VBP1P61758 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.02□□□□□ -0.33
VBP1P61758 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VBP1P61758 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.02□□□□□ -0.33
VBP1P61758 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 AL022313.4-201ENST00000562756 2046 ntBASIC13.01□□□□□ -0.33
VBP1P61758 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 AC104758.3-203ENST00000562938 2123 ntBASIC13.01□□□□□ -0.33
VBP1P61758 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.01□□□□□ -0.33
VBP1P61758 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VBP1P61758 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.01□□□□□ -0.33
VBP1P61758 AL031284.1-201ENST00000419297 478 ntBASIC13.01□□□□□ -0.33
VBP1P61758 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 SORD2P-201ENST00000558556 1069 ntBASIC13.01□□□□□ -0.33
VBP1P61758 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VBP1P61758 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 AC000095.1-201ENST00000603208 874 ntBASIC13.01□□□□□ -0.33
VBP1P61758 Z83851.2-201ENST00000609564 659 ntBASIC13.01□□□□□ -0.33
VBP1P61758 AC026120.1-201ENST00000611536 926 ntBASIC13.01□□□□□ -0.33
VBP1P61758 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 AC084121.4-201ENST00000641598 221 ntBASIC13.01□□□□□ -0.33
VBP1P61758 AF228730.8-201ENST00000642140 221 ntBASIC13.01□□□□□ -0.33
VBP1P61758 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.01□□□□□ -0.33
VBP1P61758 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms