Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZC3H6P61129 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZC3H6P61129 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZC3H6P61129 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZC3H6P61129 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZC3H6P61129 RPL3P2-204ENST00000413027 1203 ntBASIC19.02■□□□□ 0.64
ZC3H6P61129 KRT18P4-201ENST00000422599 1288 ntBASIC19.02■□□□□ 0.64
ZC3H6P61129 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC19.02■□□□□ 0.64
ZC3H6P61129 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ZC3H6P61129 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC19.02■□□□□ 0.64
ZC3H6P61129 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZC3H6P61129 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC19.02■□□□□ 0.64
ZC3H6P61129 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
ZC3H6P61129 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC19.02■□□□□ 0.64
ZC3H6P61129 BATF-202ENST00000555504 361 ntTSL 2 BASIC19.02■□□□□ 0.64
ZC3H6P61129 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC19.02■□□□□ 0.64
ZC3H6P61129 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC19.02■□□□□ 0.64
ZC3H6P61129 RARS-210ENST00000626454 177 ntTSL 5 BASIC19.02■□□□□ 0.64
ZC3H6P61129 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC19.02■□□□□ 0.64
ZC3H6P61129 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC19.02■□□□□ 0.64
ZC3H6P61129 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.02■□□□□ 0.64
ZC3H6P61129 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.02■□□□□ 0.64
ZC3H6P61129 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZC3H6P61129 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC19.02■□□□□ 0.64
ZC3H6P61129 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ZC3H6P61129 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZC3H6P61129 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ZC3H6P61129 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
ZC3H6P61129 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC19.02■□□□□ 0.63
ZC3H6P61129 KRT8P43-201ENST00000406052 1458 ntBASIC19.02■□□□□ 0.63
ZC3H6P61129 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.02■□□□□ 0.63
ZC3H6P61129 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC19.02■□□□□ 0.63
ZC3H6P61129 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZC3H6P61129 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H6P61129 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ZC3H6P61129 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H6P61129 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC19.01■□□□□ 0.63
ZC3H6P61129 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 AL354702.1-201ENST00000442006 1960 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ZC3H6P61129 AC106827.1-201ENST00000366454 431 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 GEMIN8P4-201ENST00000380526 729 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 PSAT1P2-201ENST00000426107 972 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 RPL3P5-201ENST00000441645 1232 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 AL451000.1-201ENST00000451300 1186 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC19.01■□□□□ 0.63
ZC3H6P61129 AC092903.1-201ENST00000466506 262 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC19.01■□□□□ 0.63
ZC3H6P61129 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC19.01■□□□□ 0.63
ZC3H6P61129 CES1P2-201ENST00000566467 1242 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 RN7SL556P-201ENST00000582856 298 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 RN7SL121P-201ENST00000584223 273 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 AC104506.1-201ENST00000609247 429 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC19.01■□□□□ 0.63
ZC3H6P61129 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H6P61129 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC19.01■□□□□ 0.63
ZC3H6P61129 FKBP4P8-201ENST00000610931 1369 ntBASIC19.01■□□□□ 0.63
ZC3H6P61129 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H6P61129 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ZC3H6P61129 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H6P61129 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H6P61129 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
ZC3H6P61129 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H6P61129 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.01■□□□□ 0.63
ZC3H6P61129 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.01■□□□□ 0.63
ZC3H6P61129 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H6P61129 AC138761.6-201ENST00000583997 1423 ntBASIC19■□□□□ 0.63
ZC3H6P61129 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H6P61129 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H6P61129 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZC3H6P61129 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
ZC3H6P61129 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H6P61129 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H6P61129 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
ZC3H6P61129 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H6P61129 PIFO-201ENST00000369737 746 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H6P61129 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZC3H6P61129 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H6P61129 AF274858.1-201ENST00000406288 372 ntBASIC19■□□□□ 0.63
ZC3H6P61129 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H6P61129 AL080243.1-201ENST00000423293 1060 ntBASIC19■□□□□ 0.63
ZC3H6P61129 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC19■□□□□ 0.63
ZC3H6P61129 NME6-208ENST00000435684 599 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H6P61129 RNLS-203ENST00000437752 525 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H6P61129 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC19■□□□□ 0.63
ZC3H6P61129 IGHEP2-201ENST00000519308 1256 ntBASIC19■□□□□ 0.63
ZC3H6P61129 DLK1-205ENST00000556051 469 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 1121.2 ms