Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.54□□□□□ -0.4
ACTBP60709 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.54□□□□□ -0.4
ACTBP60709 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.54□□□□□ -0.4
ACTBP60709 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.54□□□□□ -0.4
ACTBP60709 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 RNA5SP421-201ENST00000516864 134 ntBASIC12.54□□□□□ -0.4
ACTBP60709 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 AC135586.1-201ENST00000539323 574 ntBASIC12.54□□□□□ -0.4
ACTBP60709 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
ACTBP60709 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ACTBP60709 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.54□□□□□ -0.4
ACTBP60709 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ACTBP60709 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.54□□□□□ -0.4
ACTBP60709 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.54□□□□□ -0.4
ACTBP60709 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 Z82170.1-201ENST00000625081 3192 ntBASIC12.54□□□□□ -0.4
ACTBP60709 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.54□□□□□ -0.4
ACTBP60709 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.53□□□□□ -0.4
ACTBP60709 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ACTBP60709 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
ACTBP60709 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.53□□□□□ -0.4
ACTBP60709 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.53□□□□□ -0.4
ACTBP60709 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ACTBP60709 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
ACTBP60709 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.53□□□□□ -0.4
ACTBP60709 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ACTBP60709 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.53□□□□□ -0.4
ACTBP60709 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.53□□□□□ -0.4
ACTBP60709 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.53□□□□□ -0.4
ACTBP60709 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.53□□□□□ -0.4
ACTBP60709 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.53□□□□□ -0.4
ACTBP60709 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.53□□□□□ -0.4
ACTBP60709 DUX4L47-201ENST00000566374 394 ntBASIC12.53□□□□□ -0.4
ACTBP60709 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
ACTBP60709 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 AC027796.2-201ENST00000575326 344 ntBASIC12.53□□□□□ -0.4
ACTBP60709 AC008738.7-201ENST00000609744 511 ntBASIC12.53□□□□□ -0.4
ACTBP60709 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 AL603764.1-201ENST00000636452 321 ntBASIC12.53□□□□□ -0.4
ACTBP60709 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ACTBP60709 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.53□□□□□ -0.4
ACTBP60709 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ACTBP60709 AC135782.3-201ENST00000562782 2105 ntBASIC12.53□□□□□ -0.4
ACTBP60709 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ACTBP60709 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.53□□□□□ -0.4
ACTBP60709 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms