Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CDH13P55290 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CDH13P55290 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CDH13P55290 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.22□□□□□ -0.13
CDH13P55290 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH13P55290 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH13P55290 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 FAM197Y7-201ENST00000432892 766 ntBASIC14.22□□□□□ -0.13
CDH13P55290 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.22□□□□□ -0.13
CDH13P55290 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.22□□□□□ -0.13
CDH13P55290 AC027237.1-201ENST00000560942 655 ntBASIC14.22□□□□□ -0.13
CDH13P55290 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.22□□□□□ -0.13
CDH13P55290 AL355385.1-201ENST00000606123 409 ntBASIC14.22□□□□□ -0.13
CDH13P55290 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH13P55290 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CDH13P55290 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDH13P55290 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CDH13P55290 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDH13P55290 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH13P55290 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDH13P55290 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CDH13P55290 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH13P55290 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH13P55290 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDH13P55290 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH13P55290 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDH13P55290 AC005229.1-201ENST00000392885 409 ntBASIC14.21□□□□□ -0.13
CDH13P55290 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
CDH13P55290 C2orf27AP3-201ENST00000434123 579 ntBASIC14.21□□□□□ -0.13
CDH13P55290 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDH13P55290 AL161932.2-201ENST00000435436 679 ntBASIC14.21□□□□□ -0.13
CDH13P55290 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH13P55290 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.21□□□□□ -0.13
CDH13P55290 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH13P55290 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CDH13P55290 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH13P55290 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDH13P55290 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CDH13P55290 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CDH13P55290 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.21□□□□□ -0.13
CDH13P55290 MIR497HG-202ENST00000572453 3838 ntBASIC14.21□□□□□ -0.13
CDH13P55290 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH13P55290 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.21□□□□□ -0.13
CDH13P55290 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH13P55290 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH13P55290 AL354718.3-201ENST00000616414 581 ntBASIC14.21□□□□□ -0.13
CDH13P55290 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH13P55290 CR382287.1-201ENST00000623954 586 ntBASIC14.21□□□□□ -0.13
CDH13P55290 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH13P55290 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDH13P55290 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH13P55290 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH13P55290 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH13P55290 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDH13P55290 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.21□□□□□ -0.14
CDH13P55290 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH13P55290 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.21□□□□□ -0.14
CDH13P55290 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH13P55290 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH13P55290 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CDH13P55290 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH13P55290 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.21□□□□□ -0.14
CDH13P55290 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CDH13P55290 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDH13P55290 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 CICP8-201ENST00000455800 2813 ntBASIC14.2□□□□□ -0.14
CDH13P55290 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDH13P55290 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 AL359183.1-201ENST00000623796 2132 ntBASIC14.2□□□□□ -0.14
CDH13P55290 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms