Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 AL157791.1-201ENST00000553667 1699 ntBASIC15.57■□□□□ 0.08
VCPP55072 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
VCPP55072 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.57■□□□□ 0.08
VCPP55072 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.57■□□□□ 0.08
VCPP55072 AC010234.1-201ENST00000494599 870 ntBASIC15.57■□□□□ 0.08
VCPP55072 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.57■□□□□ 0.08
VCPP55072 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 AC106820.3-201ENST00000561653 397 ntBASIC15.57■□□□□ 0.08
VCPP55072 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.57■□□□□ 0.08
VCPP55072 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.57■□□□□ 0.08
VCPP55072 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 AC138466.3-201ENST00000619983 221 ntBASIC15.57■□□□□ 0.08
VCPP55072 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 AC006504.5-208ENST00000588784 2401 ntBASIC15.57■□□□□ 0.08
VCPP55072 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.57■□□□□ 0.08
VCPP55072 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCPP55072 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.57■□□□□ 0.08
VCPP55072 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.57■□□□□ 0.08
VCPP55072 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.56■□□□□ 0.08
VCPP55072 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.56■□□□□ 0.08
VCPP55072 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VCPP55072 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.56■□□□□ 0.08
VCPP55072 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.56■□□□□ 0.08
VCPP55072 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VCPP55072 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
VCPP55072 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.56■□□□□ 0.08
VCPP55072 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.56■□□□□ 0.08
VCPP55072 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 AL353637.1-201ENST00000451571 732 ntBASIC15.56■□□□□ 0.08
VCPP55072 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.56■□□□□ 0.08
VCPP55072 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.56■□□□□ 0.08
VCPP55072 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.56■□□□□ 0.08
VCPP55072 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.56■□□□□ 0.08
VCPP55072 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.56■□□□□ 0.08
VCPP55072 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.56■□□□□ 0.08
VCPP55072 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.56■□□□□ 0.08
VCPP55072 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.56■□□□□ 0.08
VCPP55072 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
VCPP55072 YRDCP1-201ENST00000621419 643 ntBASIC15.56■□□□□ 0.08
VCPP55072 AC127024.7-201ENST00000625101 200 ntBASIC15.56■□□□□ 0.08
VCPP55072 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCPP55072 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VCPP55072 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms