Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.53□□□□□ -0.56
CDC34P49427 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.53□□□□□ -0.56
CDC34P49427 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CDC34P49427 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.52□□□□□ -0.56
CDC34P49427 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.56
CDC34P49427 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.52□□□□□ -0.56
CDC34P49427 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC34P49427 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.52□□□□□ -0.56
CDC34P49427 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC34P49427 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.52□□□□□ -0.56
CDC34P49427 CES1P1-201ENST00000421606 1704 ntBASIC11.52□□□□□ -0.56
CDC34P49427 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC34P49427 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC34P49427 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC34P49427 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.52□□□□□ -0.56
CDC34P49427 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.52□□□□□ -0.57
CDC34P49427 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC34P49427 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC34P49427 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CDC34P49427 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC34P49427 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.52□□□□□ -0.57
CDC34P49427 MCCD1P2-201ENST00000423228 335 ntBASIC11.52□□□□□ -0.57
CDC34P49427 NUS1P3-201ENST00000423502 862 ntBASIC11.52□□□□□ -0.57
CDC34P49427 AC004832.2-201ENST00000426397 482 ntBASIC11.52□□□□□ -0.57
CDC34P49427 MKNK2P1-201ENST00000437526 628 ntBASIC11.52□□□□□ -0.57
CDC34P49427 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC34P49427 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
CDC34P49427 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.52□□□□□ -0.57
CDC34P49427 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.52□□□□□ -0.57
CDC34P49427 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC34P49427 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.52□□□□□ -0.57
CDC34P49427 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.52□□□□□ -0.57
CDC34P49427 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC34P49427 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC34P49427 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.52□□□□□ -0.57
CDC34P49427 KRT18P8-201ENST00000581937 1246 ntBASIC11.52□□□□□ -0.57
CDC34P49427 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.52□□□□□ -0.57
CDC34P49427 AC105339.1-204ENST00000636249 355 ntBASIC11.52□□□□□ -0.57
CDC34P49427 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11.52□□□□□ -0.57
CDC34P49427 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.52□□□□□ -0.57
CDC34P49427 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC34P49427 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC34P49427 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.52□□□□□ -0.57
CDC34P49427 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CDC34P49427 AL138799.1-201ENST00000448213 1675 ntBASIC11.52□□□□□ -0.57
CDC34P49427 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CDC34P49427 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CDC34P49427 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.52□□□□□ -0.57
CDC34P49427 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC34P49427 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC34P49427 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 MKRN5P-201ENST00000445263 1467 ntBASIC11.51□□□□□ -0.57
CDC34P49427 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CDC34P49427 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms