Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 MIR4783-201ENST00000580343 82 ntBASIC12.45□□□□□ -0.42
CCL1P22362 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.45□□□□□ -0.42
CCL1P22362 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.45□□□□□ -0.42
CCL1P22362 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.45□□□□□ -0.42
CCL1P22362 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CCL1P22362 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CCL1P22362 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CCL1P22362 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CCL1P22362 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CCL1P22362 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 AC007952.5-201ENST00000572818 1486 ntBASIC12.45□□□□□ -0.42
CCL1P22362 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.45□□□□□ -0.42
CCL1P22362 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CCL1P22362 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CCL1P22362 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.45□□□□□ -0.42
CCL1P22362 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL1P22362 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL1P22362 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL1P22362 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL1P22362 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL1P22362 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL1P22362 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.44□□□□□ -0.42
CCL1P22362 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL1P22362 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CCL1P22362 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CCL1P22362 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 COX5BP8-201ENST00000416911 349 ntBASIC12.44□□□□□ -0.42
CCL1P22362 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL1P22362 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.44□□□□□ -0.42
CCL1P22362 FAM58BP-201ENST00000439056 645 ntBASIC12.44□□□□□ -0.42
CCL1P22362 RPL7P3-201ENST00000441388 714 ntBASIC12.44□□□□□ -0.42
CCL1P22362 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.44□□□□□ -0.42
CCL1P22362 AC022217.1-201ENST00000521069 738 ntBASIC12.44□□□□□ -0.42
CCL1P22362 AP005018.1-201ENST00000525475 301 ntBASIC12.44□□□□□ -0.42
CCL1P22362 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
CCL1P22362 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL1P22362 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.44□□□□□ -0.42
CCL1P22362 AP006547.1-201ENST00000563435 692 ntBASIC12.44□□□□□ -0.42
CCL1P22362 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.44□□□□□ -0.42
CCL1P22362 AC124068.2-201ENST00000569473 1109 ntBASIC12.44□□□□□ -0.42
CCL1P22362 Z98259.2-201ENST00000641583 609 ntBASIC12.44□□□□□ -0.42
CCL1P22362 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL1P22362 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
CCL1P22362 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL1P22362 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
CCL1P22362 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL1P22362 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL1P22362 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CCL1P22362 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL1P22362 CCT8L1P-201ENST00000465400 1674 ntBASIC12.44□□□□□ -0.42
CCL1P22362 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 AL591122.2-201ENST00000624125 1853 ntBASIC12.44□□□□□ -0.42
CCL1P22362 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL1P22362 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL1P22362 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL1P22362 AC020658.7-201ENST00000624274 2442 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms