Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.77□□□□□ -0.37
RAB3BP20337 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB3BP20337 GCOM2-201ENST00000509133 1104 ntBASIC12.77□□□□□ -0.37
RAB3BP20337 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 KRT18P58-201ENST00000527480 1120 ntBASIC12.77□□□□□ -0.37
RAB3BP20337 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB3BP20337 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB3BP20337 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 AL138725.1-201ENST00000407347 1314 ntBASIC12.77□□□□□ -0.37
RAB3BP20337 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB3BP20337 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB3BP20337 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RAB3BP20337 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RAB3BP20337 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB3BP20337 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB3BP20337 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB3BP20337 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB3BP20337 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB3BP20337 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB3BP20337 DNAJB3-201ENST00000446806 729 ntBASIC12.76□□□□□ -0.37
RAB3BP20337 VDAC1P7-201ENST00000462417 847 ntBASIC12.76□□□□□ -0.37
RAB3BP20337 RPL13AP25-201ENST00000484130 612 ntBASIC12.76□□□□□ -0.37
RAB3BP20337 GIMAP3P-201ENST00000495150 836 ntBASIC12.76□□□□□ -0.37
RAB3BP20337 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.76□□□□□ -0.37
RAB3BP20337 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB3BP20337 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB3BP20337 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB3BP20337 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 MKRN5P-201ENST00000445263 1467 ntBASIC12.76□□□□□ -0.37
RAB3BP20337 AC009474.1-201ENST00000455096 1565 ntBASIC12.76□□□□□ -0.37
RAB3BP20337 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB3BP20337 AGAP12P-201ENST00000585227 2359 ntBASIC12.76□□□□□ -0.37
RAB3BP20337 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB3BP20337 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB3BP20337 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
RAB3BP20337 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.75□□□□□ -0.37
RAB3BP20337 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms