Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DOC2GP-202ENST00000514950 1163 ntBASIC13.76□□□□□ -0.21
NCK1P16333 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.76□□□□□ -0.21
NCK1P16333 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 BEND3P3-201ENST00000611030 2440 ntBASIC13.76□□□□□ -0.21
NCK1P16333 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.76□□□□□ -0.21
NCK1P16333 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.76□□□□□ -0.21
NCK1P16333 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NCK1P16333 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NCK1P16333 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.75□□□□□ -0.21
NCK1P16333 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NCK1P16333 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.75□□□□□ -0.21
NCK1P16333 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
NCK1P16333 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
NCK1P16333 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.75□□□□□ -0.21
NCK1P16333 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
NCK1P16333 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 SPDYE19P-201ENST00000338590 713 ntBASIC13.75□□□□□ -0.21
NCK1P16333 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NCK1P16333 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.75□□□□□ -0.21
NCK1P16333 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
NCK1P16333 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.75□□□□□ -0.21
NCK1P16333 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.75□□□□□ -0.21
NCK1P16333 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.75□□□□□ -0.21
NCK1P16333 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 AC067863.1-201ENST00000494933 530 ntBASIC13.75□□□□□ -0.21
NCK1P16333 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.75□□□□□ -0.21
NCK1P16333 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.75□□□□□ -0.21
NCK1P16333 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NCK1P16333 DUX4L27-201ENST00000554796 1261 ntBASIC13.75□□□□□ -0.21
NCK1P16333 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
NCK1P16333 AC124283.3-201ENST00000570869 594 ntBASIC13.75□□□□□ -0.21
NCK1P16333 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.75□□□□□ -0.21
NCK1P16333 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.75□□□□□ -0.21
NCK1P16333 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.75□□□□□ -0.21
NCK1P16333 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NCK1P16333 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NCK1P16333 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 PCDHA5-203ENST00000614258 4248 ntBASIC13.75□□□□□ -0.21
NCK1P16333 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.75□□□□□ -0.21
NCK1P16333 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 AC022144.1-201ENST00000602255 1580 ntBASIC13.75□□□□□ -0.21
NCK1P16333 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCK1P16333 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.75□□□□□ -0.21
NCK1P16333 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NCK1P16333 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms