Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.01■□□□□ 0.15
COL11A1P12107 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.01■□□□□ 0.15
COL11A1P12107 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
COL11A1P12107 AC106827.1-201ENST00000366454 431 ntBASIC16.01■□□□□ 0.15
COL11A1P12107 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.01■□□□□ 0.15
COL11A1P12107 BPIFB5P-201ENST00000457066 1099 ntBASIC16.01■□□□□ 0.15
COL11A1P12107 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
COL11A1P12107 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.01■□□□□ 0.15
COL11A1P12107 AC008026.2-201ENST00000495438 348 ntBASIC16.01■□□□□ 0.15
COL11A1P12107 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.01■□□□□ 0.15
COL11A1P12107 AC100858.1-201ENST00000514059 1228 ntBASIC16.01■□□□□ 0.15
COL11A1P12107 AL359219.1-201ENST00000556311 934 ntBASIC16.01■□□□□ 0.15
COL11A1P12107 AC010632.2-201ENST00000588369 1224 ntBASIC16.01■□□□□ 0.15
COL11A1P12107 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
COL11A1P12107 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16■□□□□ 0.15
COL11A1P12107 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
COL11A1P12107 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16■□□□□ 0.15
COL11A1P12107 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
COL11A1P12107 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16■□□□□ 0.15
COL11A1P12107 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16■□□□□ 0.15
COL11A1P12107 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16■□□□□ 0.15
COL11A1P12107 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16■□□□□ 0.15
COL11A1P12107 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC16■□□□□ 0.15
COL11A1P12107 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16■□□□□ 0.15
COL11A1P12107 AREG-202ENST00000502307 956 ntTSL 5 BASIC16■□□□□ 0.15
COL11A1P12107 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16■□□□□ 0.15
COL11A1P12107 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 AL160191.2-201ENST00000603975 601 ntBASIC16■□□□□ 0.15
COL11A1P12107 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
COL11A1P12107 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16■□□□□ 0.15
COL11A1P12107 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16■□□□□ 0.15
COL11A1P12107 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16■□□□□ 0.15
COL11A1P12107 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
COL11A1P12107 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL11A1P12107 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
COL11A1P12107 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.99■□□□□ 0.15
COL11A1P12107 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.99■□□□□ 0.15
COL11A1P12107 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.99■□□□□ 0.15
COL11A1P12107 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.99■□□□□ 0.15
COL11A1P12107 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
COL11A1P12107 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 ACTBP14-201ENST00000411655 1089 ntBASIC15.99■□□□□ 0.15
COL11A1P12107 AP000244.1-201ENST00000424582 201 ntBASIC15.99■□□□□ 0.15
COL11A1P12107 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.99■□□□□ 0.15
COL11A1P12107 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.99■□□□□ 0.15
COL11A1P12107 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.99■□□□□ 0.15
COL11A1P12107 GULOP-201ENST00000454030 748 ntBASIC15.99■□□□□ 0.15
COL11A1P12107 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.99■□□□□ 0.15
COL11A1P12107 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
COL11A1P12107 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC15.99■□□□□ 0.15
COL11A1P12107 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.99■□□□□ 0.15
COL11A1P12107 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.99■□□□□ 0.15
COL11A1P12107 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.99■□□□□ 0.15
COL11A1P12107 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 HSPA7-201ENST00000445535 1927 ntBASIC15.99■□□□□ 0.15
COL11A1P12107 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
COL11A1P12107 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL11A1P12107 RCC2P1-201ENST00000452257 1476 ntBASIC15.99■□□□□ 0.15
COL11A1P12107 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
COL11A1P12107 U3.5-201ENST00000363448 216 ntBASIC15.98■□□□□ 0.15
COL11A1P12107 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
COL11A1P12107 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC15.98■□□□□ 0.15
COL11A1P12107 KRT18P4-201ENST00000422599 1288 ntBASIC15.98■□□□□ 0.15
COL11A1P12107 AL929302.1-201ENST00000426556 871 ntBASIC15.98■□□□□ 0.15
COL11A1P12107 RN7SL375P-201ENST00000492442 298 ntBASIC15.98■□□□□ 0.15
COL11A1P12107 CES1P2-201ENST00000566467 1242 ntBASIC15.98■□□□□ 0.15
COL11A1P12107 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms