Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.04■□□□□ 0.32
TOP1P11387 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.04■□□□□ 0.32
TOP1P11387 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.04■□□□□ 0.32
TOP1P11387 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.04■□□□□ 0.32
TOP1P11387 IGHJ2P-201ENST00000454480 60 ntBASIC17.04■□□□□ 0.32
TOP1P11387 TPT1P11-201ENST00000458482 498 ntBASIC17.04■□□□□ 0.32
TOP1P11387 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP1P11387 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP1P11387 SORD2P-201ENST00000558556 1069 ntBASIC17.04■□□□□ 0.32
TOP1P11387 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.04■□□□□ 0.32
TOP1P11387 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP1P11387 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
TOP1P11387 AC215219.1-201ENST00000400706 1817 ntBASIC17.04■□□□□ 0.32
TOP1P11387 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TOP1P11387 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP1P11387 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 AC018629.1-201ENST00000623381 1736 ntBASIC17.04■□□□□ 0.32
TOP1P11387 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TOP1P11387 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TOP1P11387 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.04■□□□□ 0.32
TOP1P11387 AC097359.2-201ENST00000604992 2389 ntBASIC17.03■□□□□ 0.32
TOP1P11387 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.03■□□□□ 0.32
TOP1P11387 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TOP1P11387 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.03■□□□□ 0.32
TOP1P11387 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TOP1P11387 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 SLC25A24P2-201ENST00000415059 510 ntBASIC17.03■□□□□ 0.32
TOP1P11387 ACTG1P2-201ENST00000415776 1125 ntBASIC17.03■□□□□ 0.32
TOP1P11387 ACTG1P11-201ENST00000425411 1125 ntBASIC17.03■□□□□ 0.32
TOP1P11387 ST13P19-201ENST00000442505 1124 ntBASIC17.03■□□□□ 0.32
TOP1P11387 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.03■□□□□ 0.32
TOP1P11387 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.03■□□□□ 0.32
TOP1P11387 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.03■□□□□ 0.32
TOP1P11387 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TOP1P11387 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.03■□□□□ 0.32
TOP1P11387 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.03■□□□□ 0.32
TOP1P11387 MIR3619-201ENST00000579667 83 ntBASIC17.03■□□□□ 0.32
TOP1P11387 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.03■□□□□ 0.32
TOP1P11387 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.03■□□□□ 0.32
TOP1P11387 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.03■□□□□ 0.32
TOP1P11387 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.03■□□□□ 0.32
TOP1P11387 AL157813.1-201ENST00000612996 587 ntBASIC17.03■□□□□ 0.32
TOP1P11387 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.03■□□□□ 0.32
TOP1P11387 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.03■□□□□ 0.32
TOP1P11387 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
TOP1P11387 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TOP1P11387 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TOP1P11387 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.03■□□□□ 0.32
TOP1P11387 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TOP1P11387 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TOP1P11387 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP1P11387 AC027601.5-201ENST00000624065 2482 ntBASIC17.03■□□□□ 0.32
TOP1P11387 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.03■□□□□ 0.32
TOP1P11387 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TOP1P11387 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.02■□□□□ 0.32
TOP1P11387 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.02■□□□□ 0.32
TOP1P11387 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP1P11387 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP1P11387 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.02■□□□□ 0.32
TOP1P11387 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TOP1P11387 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP1P11387 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP1P11387 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP1P11387 AHCYP4-201ENST00000419201 1315 ntBASIC17.02■□□□□ 0.32
TOP1P11387 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP1P11387 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TOP1P11387 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TOP1P11387 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TOP1P11387 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP1P11387 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.02■□□□□ 0.32
TOP1P11387 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TOP1P11387 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.02■□□□□ 0.32
TOP1P11387 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.02■□□□□ 0.32
TOP1P11387 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms