Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 YBX1P6-201ENST00000442962 1002 ntBASIC15□□□□□ -0.01
CD48P09326 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 KRT223P-202ENST00000449164 1292 ntBASIC15□□□□□ -0.01
CD48P09326 BNIP3P42-201ENST00000454982 569 ntBASIC15□□□□□ -0.01
CD48P09326 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15□□□□□ -0.01
CD48P09326 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15□□□□□ -0.01
CD48P09326 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 AC100827.2-201ENST00000563214 1194 ntBASIC15□□□□□ -0.01
CD48P09326 AC005730.2-201ENST00000564549 1184 ntBASIC15□□□□□ -0.01
CD48P09326 BNIP3P29-201ENST00000598302 571 ntBASIC15□□□□□ -0.01
CD48P09326 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15□□□□□ -0.01
CD48P09326 AC133552.6-201ENST00000613406 534 ntBASIC15□□□□□ -0.01
CD48P09326 AC011447.5-201ENST00000616168 564 ntBASIC15□□□□□ -0.01
CD48P09326 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CD48P09326 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15□□□□□ -0.01
CD48P09326 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CD48P09326 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15□□□□□ -0.01
CD48P09326 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15□□□□□ -0.01
CD48P09326 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15□□□□□ -0.01
CD48P09326 MIR600HG-201ENST00000449175 5984 ntBASIC15□□□□□ -0.01
CD48P09326 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15□□□□□ -0.01
CD48P09326 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15□□□□□ -0.01
CD48P09326 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CD48P09326 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15□□□□□ -0.01
CD48P09326 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15□□□□□ -0.01
CD48P09326 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15□□□□□ -0.01
CD48P09326 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15□□□□□ -0.01
CD48P09326 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CD48P09326 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.99□□□□□ -0.01
CD48P09326 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.99□□□□□ -0.01
CD48P09326 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 AL365181.3-201ENST00000605886 3222 ntBASIC14.99□□□□□ -0.01
CD48P09326 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.99□□□□□ -0.01
CD48P09326 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.99□□□□□ -0.01
CD48P09326 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.99□□□□□ -0.01
CD48P09326 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.99□□□□□ -0.01
CD48P09326 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.99□□□□□ -0.01
CD48P09326 RPSAP36-202ENST00000494591 1261 ntBASIC14.99□□□□□ -0.01
CD48P09326 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.99□□□□□ -0.01
CD48P09326 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.99□□□□□ -0.01
CD48P09326 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.99□□□□□ -0.01
CD48P09326 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 AP005482.1-201ENST00000563722 1273 ntBASIC14.99□□□□□ -0.01
CD48P09326 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.99□□□□□ -0.01
CD48P09326 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
CD48P09326 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.99□□□□□ -0.01
CD48P09326 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CD48P09326 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CD48P09326 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CD48P09326 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CD48P09326 AC144522.1-201ENST00000625111 1658 ntBASIC14.99□□□□□ -0.01
CD48P09326 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 AL928654.5-201ENST00000624831 2501 ntBASIC14.99□□□□□ -0.01
CD48P09326 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD48P09326 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CD48P09326 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CD48P09326 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.98□□□□□ -0.01
CD48P09326 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.98□□□□□ -0.01
CD48P09326 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CD48P09326 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.98□□□□□ -0.01
CD48P09326 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms