Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.58□□□□□ -0.07
APOA4P06727 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
APOA4P06727 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
APOA4P06727 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
APOA4P06727 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
APOA4P06727 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
APOA4P06727 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.58□□□□□ -0.07
APOA4P06727 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.58□□□□□ -0.07
APOA4P06727 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.58□□□□□ -0.07
APOA4P06727 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.58□□□□□ -0.08
APOA4P06727 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
APOA4P06727 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
APOA4P06727 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
APOA4P06727 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
APOA4P06727 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 AL136309.1-201ENST00000403917 691 ntBASIC14.58□□□□□ -0.08
APOA4P06727 MIR1909-201ENST00000411312 80 ntBASIC14.58□□□□□ -0.08
APOA4P06727 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
APOA4P06727 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.58□□□□□ -0.08
APOA4P06727 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.58□□□□□ -0.08
APOA4P06727 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.58□□□□□ -0.08
APOA4P06727 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
APOA4P06727 HILS1-202ENST00000545329 423 ntBASIC14.58□□□□□ -0.08
APOA4P06727 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.58□□□□□ -0.08
APOA4P06727 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.58□□□□□ -0.08
APOA4P06727 AC239800.4-201ENST00000603712 296 ntBASIC14.58□□□□□ -0.08
APOA4P06727 AC073413.1-201ENST00000603927 732 ntBASIC14.58□□□□□ -0.08
APOA4P06727 AC017083.2-201ENST00000608069 979 ntBASIC14.58□□□□□ -0.08
APOA4P06727 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.58□□□□□ -0.08
APOA4P06727 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.58□□□□□ -0.08
APOA4P06727 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 AP001002.3-201ENST00000623482 206 ntBASIC14.58□□□□□ -0.08
APOA4P06727 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.58□□□□□ -0.08
APOA4P06727 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
APOA4P06727 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
APOA4P06727 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.58□□□□□ -0.08
APOA4P06727 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.58□□□□□ -0.08
APOA4P06727 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.58□□□□□ -0.08
APOA4P06727 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOA4P06727 AC009093.2-202ENST00000620513 2079 ntBASIC14.57□□□□□ -0.08
APOA4P06727 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
APOA4P06727 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.57□□□□□ -0.08
APOA4P06727 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.57□□□□□ -0.08
APOA4P06727 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
APOA4P06727 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.57□□□□□ -0.08
APOA4P06727 AC026954.1-201ENST00000429771 1293 ntBASIC14.57□□□□□ -0.08
APOA4P06727 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.57□□□□□ -0.08
APOA4P06727 PUDPP3-201ENST00000445368 636 ntBASIC14.57□□□□□ -0.08
APOA4P06727 AL355994.2-201ENST00000447882 704 ntBASIC14.57□□□□□ -0.08
APOA4P06727 HOMER2P2-201ENST00000451621 847 ntBASIC14.57□□□□□ -0.08
APOA4P06727 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOA4P06727 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms