Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 TRIM80P-201ENST00000455685 2848 ntBASIC12.99□□□□□ -0.33
APOA1P02647 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
APOA1P02647 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
APOA1P02647 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.99□□□□□ -0.33
APOA1P02647 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
APOA1P02647 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 Z97205.2-201ENST00000564697 1639 ntBASIC12.99□□□□□ -0.33
APOA1P02647 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.98□□□□□ -0.33
APOA1P02647 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.98□□□□□ -0.33
APOA1P02647 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
APOA1P02647 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
APOA1P02647 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 AL157414.3-201ENST00000624276 1954 ntBASIC12.98□□□□□ -0.33
APOA1P02647 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
APOA1P02647 KRT8P12-202ENST00000472924 1397 ntBASIC12.98□□□□□ -0.33
APOA1P02647 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.98□□□□□ -0.33
APOA1P02647 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 AC015922.1-201ENST00000421102 1152 ntBASIC12.98□□□□□ -0.33
APOA1P02647 KRT18P64-201ENST00000434946 1219 ntBASIC12.98□□□□□ -0.33
APOA1P02647 KRT18P2-201ENST00000447938 1258 ntBASIC12.98□□□□□ -0.33
APOA1P02647 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.98□□□□□ -0.33
APOA1P02647 EMBP1-201ENST00000458200 901 ntBASIC12.98□□□□□ -0.33
APOA1P02647 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.98□□□□□ -0.33
APOA1P02647 AC004066.1-201ENST00000502488 802 ntBASIC12.98□□□□□ -0.33
APOA1P02647 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.98□□□□□ -0.33
APOA1P02647 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.98□□□□□ -0.33
APOA1P02647 BANF1P1-201ENST00000553684 263 ntBASIC12.98□□□□□ -0.33
APOA1P02647 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
APOA1P02647 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.98□□□□□ -0.33
APOA1P02647 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
APOA1P02647 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
APOA1P02647 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.98□□□□□ -0.33
APOA1P02647 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms