Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SPTA1P02549 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SPTA1P02549 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.08□□□□□ -0.32
SPTA1P02549 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC13.08□□□□□ -0.32
SPTA1P02549 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.08□□□□□ -0.32
SPTA1P02549 AL590235.1-201ENST00000564650 861 ntBASIC13.08□□□□□ -0.32
SPTA1P02549 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.08□□□□□ -0.32
SPTA1P02549 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 SIGLEC22P-201ENST00000599104 714 ntBASIC13.08□□□□□ -0.32
SPTA1P02549 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.08□□□□□ -0.32
SPTA1P02549 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC13.08□□□□□ -0.32
SPTA1P02549 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.08□□□□□ -0.32
SPTA1P02549 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC13.08□□□□□ -0.32
SPTA1P02549 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.08□□□□□ -0.32
SPTA1P02549 AC110057.1-201ENST00000636031 898 ntBASIC13.08□□□□□ -0.32
SPTA1P02549 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.08□□□□□ -0.32
SPTA1P02549 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SPTA1P02549 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SPTA1P02549 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SPTA1P02549 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.08□□□□□ -0.32
SPTA1P02549 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SPTA1P02549 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.08□□□□□ -0.32
SPTA1P02549 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SPTA1P02549 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.08□□□□□ -0.32
SPTA1P02549 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.08□□□□□ -0.32
SPTA1P02549 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.08□□□□□ -0.32
SPTA1P02549 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SPTA1P02549 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 OLA1P2-201ENST00000395519 1264 ntBASIC13.08□□□□□ -0.32
SPTA1P02549 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.08□□□□□ -0.32
SPTA1P02549 DUX4L50-201ENST00000455245 715 ntBASIC13.08□□□□□ -0.32
SPTA1P02549 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 CISD2-202ENST00000503643 808 ntTSL 2 BASIC13.08□□□□□ -0.32
SPTA1P02549 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.08□□□□□ -0.32
SPTA1P02549 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.08□□□□□ -0.32
SPTA1P02549 AC092053.3-201ENST00000641308 4975 ntBASIC13.08□□□□□ -0.32
SPTA1P02549 LILRP1-201ENST00000444199 1370 ntBASIC13.08□□□□□ -0.32
SPTA1P02549 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPTA1P02549 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.07□□□□□ -0.32
SPTA1P02549 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.07□□□□□ -0.32
SPTA1P02549 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.07□□□□□ -0.32
SPTA1P02549 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SPTA1P02549 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SPTA1P02549 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.07□□□□□ -0.32
SPTA1P02549 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 AC139712.1-201ENST00000378256 1875 ntBASIC13.07□□□□□ -0.32
SPTA1P02549 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SPTA1P02549 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.07□□□□□ -0.32
SPTA1P02549 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC13.07□□□□□ -0.32
SPTA1P02549 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.07□□□□□ -0.32
SPTA1P02549 KRT18P4-201ENST00000422599 1288 ntBASIC13.07□□□□□ -0.32
SPTA1P02549 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
SPTA1P02549 KNOP1P1-201ENST00000542108 989 ntBASIC13.07□□□□□ -0.32
SPTA1P02549 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC13.07□□□□□ -0.32
SPTA1P02549 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 ZNF436-AS1-201ENST00000335648 2547 ntBASIC13.07□□□□□ -0.32
SPTA1P02549 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SPTA1P02549 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.07□□□□□ -0.32
SPTA1P02549 AC138761.6-201ENST00000583997 1423 ntBASIC13.07□□□□□ -0.32
SPTA1P02549 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.07□□□□□ -0.32
SPTA1P02549 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.07□□□□□ -0.32
SPTA1P02549 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.07□□□□□ -0.32
SPTA1P02549 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.07□□□□□ -0.32
SPTA1P02549 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.07□□□□□ -0.32
SPTA1P02549 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.07□□□□□ -0.32
SPTA1P02549 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC13.07□□□□□ -0.32
SPTA1P02549 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.07□□□□□ -0.32
SPTA1P02549 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.07□□□□□ -0.32
SPTA1P02549 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC13.07□□□□□ -0.32
SPTA1P02549 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPTA1P02549 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPTA1P02549 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPTA1P02549 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms