Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 AL138709.1-201ENST00000614840 1693 ntBASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
POLR1DQ9Y2S0 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 AC005229.1-201ENST00000392885 409 ntBASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 INE1-201ENST00000456273 945 ntBASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 AL590640.2-201ENST00000457038 527 ntBASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 OR10B1P-201ENST00000601666 907 ntBASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 AC136759.1-202ENST00000530858 2194 ntBASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
POLR1DQ9Y2S0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 RN7SL832P-201ENST00000607781 1756 ntBASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms