Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.18□□□□□ -0.46
CCL13Q99616 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.18□□□□□ -0.46
CCL13Q99616 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.18□□□□□ -0.46
CCL13Q99616 AC005586.2-201ENST00000563946 837 ntBASIC12.18□□□□□ -0.46
CCL13Q99616 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.18□□□□□ -0.46
CCL13Q99616 AL008638.5-201ENST00000623814 1298 ntBASIC12.18□□□□□ -0.46
CCL13Q99616 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 AC090505.1-201ENST00000430515 1834 ntBASIC12.18□□□□□ -0.46
CCL13Q99616 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 AL031595.1-201ENST00000623969 4709 ntBASIC12.18□□□□□ -0.46
CCL13Q99616 PEG13-201ENST00000631594 5667 ntBASIC12.17□□□□□ -0.46
CCL13Q99616 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.17□□□□□ -0.46
CCL13Q99616 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 AC005089.1-201ENST00000619486 2241 ntBASIC12.17□□□□□ -0.46
CCL13Q99616 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CCL13Q99616 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.17□□□□□ -0.46
CCL13Q99616 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.17□□□□□ -0.46
CCL13Q99616 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.17□□□□□ -0.46
CCL13Q99616 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.17□□□□□ -0.46
CCL13Q99616 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.17□□□□□ -0.46
CCL13Q99616 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 AL160314.3-201ENST00000556041 767 ntBASIC12.17□□□□□ -0.46
CCL13Q99616 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.17□□□□□ -0.46
CCL13Q99616 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.17□□□□□ -0.46
CCL13Q99616 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 AC243960.2-201ENST00000600996 747 ntBASIC12.17□□□□□ -0.46
CCL13Q99616 AL022328.3-201ENST00000607943 679 ntBASIC12.17□□□□□ -0.46
CCL13Q99616 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.17□□□□□ -0.46
CCL13Q99616 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 AC136759.1-202ENST00000530858 2194 ntBASIC12.17□□□□□ -0.46
CCL13Q99616 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CCL13Q99616 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.17□□□□□ -0.46
CCL13Q99616 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.17□□□□□ -0.46
CCL13Q99616 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL13Q99616 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CCL13Q99616 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms