Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 ACKR1-201ENST00000368121 1240 ntBASIC10.66□□□□□ -0.7
MUC4Q99102 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
MUC4Q99102 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC10.66□□□□□ -0.7
MUC4Q99102 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.66□□□□□ -0.7
MUC4Q99102 AL583810.1-201ENST00000553344 1045 ntBASIC10.66□□□□□ -0.7
MUC4Q99102 SORD2P-201ENST00000558556 1069 ntBASIC10.66□□□□□ -0.7
MUC4Q99102 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
MUC4Q99102 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 HCG18-245ENST00000602550 559 ntTSL 4 BASIC10.66□□□□□ -0.7
MUC4Q99102 AC106872.11-201ENST00000605838 421 ntBASIC10.66□□□□□ -0.7
MUC4Q99102 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
MUC4Q99102 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 OR2I1P-210ENST00000642037 4691 ntBASIC10.66□□□□□ -0.7
MUC4Q99102 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
MUC4Q99102 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.66□□□□□ -0.7
MUC4Q99102 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
MUC4Q99102 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 AC005252.3-201ENST00000623855 2258 ntBASIC10.65□□□□□ -0.7
MUC4Q99102 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
MUC4Q99102 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC10.65□□□□□ -0.7
MUC4Q99102 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
MUC4Q99102 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 TCAF1P1-201ENST00000414990 2232 ntBASIC10.65□□□□□ -0.7
MUC4Q99102 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 CSF2RBP1-201ENST00000447905 391 ntBASIC10.65□□□□□ -0.7
MUC4Q99102 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 AC026434.2-201ENST00000506094 1078 ntBASIC10.65□□□□□ -0.7
MUC4Q99102 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
MUC4Q99102 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
MUC4Q99102 AL022328.1-201ENST00000610050 478 ntBASIC10.65□□□□□ -0.7
MUC4Q99102 AC244669.2-201ENST00000612320 853 ntBASIC10.65□□□□□ -0.7
MUC4Q99102 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.65□□□□□ -0.7
MUC4Q99102 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC10.65□□□□□ -0.7
MUC4Q99102 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MUC4Q99102 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
MUC4Q99102 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.65□□□□□ -0.7
MUC4Q99102 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
MUC4Q99102 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
MUC4Q99102 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
MUC4Q99102 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms