Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPRD1AQ96P16 AC100757.4-201ENST00000626934 759 ntBASIC14.96□□□□□ -0.01
RPRD1AQ96P16 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
RPRD1AQ96P16 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPRD1AQ96P16 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.96□□□□□ -0.01
RPRD1AQ96P16 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPRD1AQ96P16 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPRD1AQ96P16 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.96□□□□□ -0.02
RPRD1AQ96P16 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPRD1AQ96P16 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPRD1AQ96P16 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.96□□□□□ -0.02
RPRD1AQ96P16 BX640514.1-201ENST00000583223 1918 ntBASIC14.96□□□□□ -0.02
RPRD1AQ96P16 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 TUBBP5-203ENST00000508529 1334 ntBASIC14.95□□□□□ -0.02
RPRD1AQ96P16 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 AC090505.1-201ENST00000430515 1834 ntBASIC14.95□□□□□ -0.02
RPRD1AQ96P16 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.95□□□□□ -0.02
RPRD1AQ96P16 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 XBP1P1-201ENST00000436573 652 ntBASIC14.95□□□□□ -0.02
RPRD1AQ96P16 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 AC005077.2-201ENST00000449786 690 ntBASIC14.95□□□□□ -0.02
RPRD1AQ96P16 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 NAP1L6-202ENST00000641404 1222 ntBASIC14.95□□□□□ -0.02
RPRD1AQ96P16 ST20-AS1-201ENST00000560255 4223 ntBASIC14.95□□□□□ -0.02
RPRD1AQ96P16 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPRD1AQ96P16 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 AC064801.2-201ENST00000625052 1303 ntBASIC14.94□□□□□ -0.02
RPRD1AQ96P16 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 AL133338.1-201ENST00000565695 1517 ntBASIC14.94□□□□□ -0.02
RPRD1AQ96P16 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 OR2R1P-201ENST00000441404 914 ntBASIC14.94□□□□□ -0.02
RPRD1AQ96P16 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 SPTLC1P5-201ENST00000450718 252 ntBASIC14.94□□□□□ -0.02
RPRD1AQ96P16 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 AC021016.3-201ENST00000608367 477 ntBASIC14.94□□□□□ -0.02
RPRD1AQ96P16 AL157813.1-201ENST00000612996 587 ntBASIC14.94□□□□□ -0.02
RPRD1AQ96P16 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPRD1AQ96P16 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms