Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 KRT18P36-201ENST00000411618 1276 ntBASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 PGAM1P5-201ENST00000548011 764 ntBASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 AC140658.4-201ENST00000561990 352 ntBASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 AC133552.6-201ENST00000613406 534 ntBASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 AL023803.2-201ENST00000620080 638 ntBASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 SHMT1P1-201ENST00000419974 1312 ntBASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 AC130686.1-201ENST00000622936 2466 ntBASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 FAM21FP-201ENST00000426241 1131 ntBASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 RPSAP36-202ENST00000494591 1261 ntBASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDLIM5Q96HC4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 KRT8P29-201ENST00000420409 1371 ntBASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDLIM5Q96HC4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms