Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 MIR663B-201ENST00000408361 115 ntBASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 SCARNA20.5-201ENST00000516991 142 ntBASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 AL096828.3-201ENST00000615354 462 ntBASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 AC018442.1-201ENST00000421439 2061 ntBASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSMEM1Q8WWF3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 AL136309.1-201ENST00000403917 691 ntBASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 CALR4P-201ENST00000431943 946 ntBASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 HSPB1P2-201ENST00000448722 546 ntBASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 DUX4L47-201ENST00000566374 394 ntBASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 AC138466.3-201ENST00000619983 221 ntBASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 KRT8P4-201ENST00000509735 1454 ntBASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 AC138028.6-201ENST00000616106 1482 ntBASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
SSMEM1Q8WWF3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms