Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 MIR193A-201ENST00000384882 88 ntBASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 GUCY2EP-203ENST00000531117 1918 ntBASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AC015813.5-201ENST00000624641 1514 ntBASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 RN7SKP212-201ENST00000410851 328 ntBASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 CD81-209ENST00000492627 886 ntTSL 3 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AC114812.4-201ENST00000506676 757 ntBASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 MIR5091-201ENST00000578707 93 ntBASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AC008620.2-201ENST00000510294 1569 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 SRP9P1-201ENST00000445874 261 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 RN7SL789P-201ENST00000478944 293 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AC008741.2-201ENST00000612792 3115 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 TUBB2BP1-201ENST00000404155 871 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 RN7SL69P-201ENST00000468423 272 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AC099343.1-201ENST00000513481 609 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 PAX6-247ENST00000638965 979 ntTSL 5 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms