Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 KRT8P14-201ENST00000414254 1442 ntBASIC12.62□□□□□ -0.39
BEST4Q8NFU0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 TUBB3P1-201ENST00000405796 1332 ntBASIC12.62□□□□□ -0.39
BEST4Q8NFU0 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 AP000437.1-201ENST00000624057 2085 ntBASIC12.61□□□□□ -0.39
BEST4Q8NFU0 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 NCLP1-201ENST00000445357 1963 ntBASIC12.61□□□□□ -0.39
BEST4Q8NFU0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 AGAP12P-201ENST00000585227 2359 ntBASIC12.61□□□□□ -0.39
BEST4Q8NFU0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 MIR574-201ENST00000385209 96 ntBASIC12.61□□□□□ -0.39
BEST4Q8NFU0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 AL512356.2-201ENST00000546955 174 ntBASIC12.61□□□□□ -0.39
BEST4Q8NFU0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BEST4Q8NFU0 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms