Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT1Q8NF37 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT1Q8NF37 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 CYP4F23P-201ENST00000593402 1579 ntBASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AL161932.2-201ENST00000435436 679 ntBASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AC005324.6-201ENST00000587972 613 ntBASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 BNIP3P13-201ENST00000599968 566 ntBASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AC133540.1-201ENST00000620845 1019 ntBASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AC022748.3-201ENST00000621828 275 ntBASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 AC064801.2-201ENST00000625052 1303 ntBASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT1Q8NF37 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.07
LPCAT1Q8NF37 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 HSPA8P5-201ENST00000456928 2069 ntBASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 AC104073.2-201ENST00000453737 312 ntBASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 AC106794.1-201ENST00000506935 792 ntBASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 AC243960.2-201ENST00000600996 747 ntBASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 AL022328.3-201ENST00000607943 679 ntBASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT1Q8NF37 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms